Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.91□□□□□ -0.34
COMMD9Q9P000 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COMMD9Q9P000 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COMMD9Q9P000 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COMMD9Q9P000 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 AL591424.1-201ENST00000442569 1213 ntBASIC12.9□□□□□ -0.34
COMMD9Q9P000 KRT18P2-201ENST00000447938 1258 ntBASIC12.9□□□□□ -0.34
COMMD9Q9P000 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 RNA5SP410-201ENST00000516285 106 ntBASIC12.9□□□□□ -0.34
COMMD9Q9P000 RNA5SP416-201ENST00000516838 111 ntBASIC12.9□□□□□ -0.34
COMMD9Q9P000 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 KRT126P-201ENST00000549467 1181 ntBASIC12.9□□□□□ -0.34
COMMD9Q9P000 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 AL138918.1-201ENST00000568306 659 ntBASIC12.9□□□□□ -0.34
COMMD9Q9P000 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COMMD9Q9P000 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.9□□□□□ -0.34
COMMD9Q9P000 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
COMMD9Q9P000 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
COMMD9Q9P000 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
COMMD9Q9P000 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 FOXO1B-201ENST00000504678 1527 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 AL355306.1-201ENST00000415580 579 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 AC142381.1-201ENST00000426099 345 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 TPM4P1-201ENST00000436100 807 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 EEF1DP4-201ENST00000446006 880 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 AL135744.1-201ENST00000565098 629 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 AC027307.2-201ENST00000591252 911 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.89□□□□□ -0.35
COMMD9Q9P000 AL450472.2-201ENST00000603663 1156 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 AC026979.3-201ENST00000607315 403 ntBASIC12.89□□□□□ -0.35
COMMD9Q9P000 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COMMD9Q9P000 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms