Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
THUMPD1Q9NXG2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
THUMPD1Q9NXG2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 TPT1P11-201ENST00000458482 498 ntBASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 FAM86LP-201ENST00000478302 853 ntBASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 AL603764.1-201ENST00000636452 321 ntBASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
THUMPD1Q9NXG2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC022144.1-201ENST00000602255 1580 ntBASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC009407.1-201ENST00000568958 598 ntBASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.18□□□□□ -0.14
THUMPD1Q9NXG2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms