Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 AC018665.1-201ENST00000622927 1362 ntBASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 AC026434.2-201ENST00000506094 1078 ntBASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 GNRHR2-203ENST00000581100 1187 ntBASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 AL009178.2-201ENST00000597278 2719 ntBASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 CICP24-201ENST00000605464 2705 ntBASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUEDC1Q9NWM3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.58□□□□□ -0.07
CUEDC1Q9NWM3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
CUEDC1Q9NWM3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CUEDC1Q9NWM3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CUEDC1Q9NWM3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AC005229.1-201ENST00000392885 409 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 BNIP3P42-201ENST00000454982 569 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 BTNL10-201ENST00000595971 695 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 BNIP3P29-201ENST00000598302 571 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AC004466.1-201ENST00000599515 1080 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AC011447.5-201ENST00000616168 564 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AC023090.2-201ENST00000625182 2110 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms