Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AP003171.2-201ENST00000528208 925 ntBASIC15.04■□□□□ -0
TM9SF3Q9HD45 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 AL603764.1-201ENST00000636452 321 ntBASIC15.04■□□□□ -0
TM9SF3Q9HD45 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF3Q9HD45 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF3Q9HD45 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ELK2AP-201ENST00000392510 1007 ntBASIC15.03■□□□□ -0
TM9SF3Q9HD45 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 HIST2H2BB-201ENST00000449108 381 ntBASIC15.03■□□□□ -0
TM9SF3Q9HD45 EIF4HP1-201ENST00000453115 687 ntBASIC15.03■□□□□ -0
TM9SF3Q9HD45 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 AC044849.1-201ENST00000519737 1188 ntBASIC15.03■□□□□ -0
TM9SF3Q9HD45 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 AC106820.3-201ENST00000561653 397 ntBASIC15.03■□□□□ -0
TM9SF3Q9HD45 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF3Q9HD45 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF3Q9HD45 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC105250.1-201ENST00000509378 2057 ntBASIC15.02■□□□□ -0
TM9SF3Q9HD45 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC090616.6-203ENST00000579186 1945 ntBASIC15.02■□□□□ -0
TM9SF3Q9HD45 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.02■□□□□ -0
TM9SF3Q9HD45 NKAIN1P1-201ENST00000435754 582 ntBASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 SERPINA13P-202ENST00000478994 924 ntBASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 AC138649.2-201ENST00000615886 705 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms