Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC024681.1-201ENST00000521917 487 ntBASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC091812.3-201ENST00000621362 345 ntBASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AC027601.3-201ENST00000622907 509 ntBASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 AL805961.1-203ENST00000641078 1258 ntBASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PAAF1Q9BRP4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AC091046.1-201ENST00000331871 207 ntBASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AL157407.1-201ENST00000435784 904 ntBASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AC012441.2-201ENST00000444843 739 ntBASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AC245884.6-201ENST00000515672 1067 ntBASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 CU633904.3-201ENST00000624042 1029 ntBASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PAAF1Q9BRP4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.86■□□□□ 0.13
PAAF1Q9BRP4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PAAF1Q9BRP4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms