Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 AL591122.2-201ENST00000624125 1853 ntBASIC13.79□□□□□ -0.2
SNX18Q96RF0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 AC027369.6-201ENST00000525520 931 ntBASIC13.79□□□□□ -0.2
SNX18Q96RF0 AC190387.1-201ENST00000551683 408 ntBASIC13.79□□□□□ -0.2
SNX18Q96RF0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 AF228730.6-201ENST00000641497 218 ntBASIC13.79□□□□□ -0.2
SNX18Q96RF0 AC084121.3-201ENST00000641716 218 ntBASIC13.79□□□□□ -0.2
SNX18Q96RF0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SNX18Q96RF0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 RN7SL204P-201ENST00000582831 262 ntBASIC13.78□□□□□ -0.2
SNX18Q96RF0 AC239800.4-201ENST00000603712 296 ntBASIC13.78□□□□□ -0.2
SNX18Q96RF0 LINC01115-203ENST00000606068 577 ntBASIC13.78□□□□□ -0.2
SNX18Q96RF0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 AC087499.5-201ENST00000452760 1342 ntBASIC13.78□□□□□ -0.2
SNX18Q96RF0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNX18Q96RF0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SNX18Q96RF0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms