Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 MRPL37P1-201ENST00000592451 1337 ntBASIC15.27■□□□□ 0.04
RTP4Q96DX8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 AC093433.1-201ENST00000458048 571 ntBASIC15.27■□□□□ 0.04
RTP4Q96DX8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 GCOM2-201ENST00000509133 1104 ntBASIC15.27■□□□□ 0.04
RTP4Q96DX8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 AC138696.2-201ENST00000607376 223 ntBASIC15.27■□□□□ 0.04
RTP4Q96DX8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.27■□□□□ 0.03
RTP4Q96DX8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.27■□□□□ 0.03
RTP4Q96DX8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RTP4Q96DX8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTP4Q96DX8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 FO681548.1-201ENST00000455617 1132 ntBASIC15.26■□□□□ 0.03
RTP4Q96DX8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 AC009486.1-201ENST00000569860 813 ntBASIC15.26■□□□□ 0.03
RTP4Q96DX8 MIR6074-201ENST00000612054 107 ntBASIC15.26■□□□□ 0.03
RTP4Q96DX8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 AL162274.1-201ENST00000617191 1098 ntBASIC15.26■□□□□ 0.03
RTP4Q96DX8 CU634019.7-201ENST00000624153 1185 ntBASIC15.26■□□□□ 0.03
RTP4Q96DX8 FP236241.2-201ENST00000624906 1185 ntBASIC15.26■□□□□ 0.03
RTP4Q96DX8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 AC067930.6-201ENST00000623257 4947 ntBASIC15.26■□□□□ 0.03
RTP4Q96DX8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RTP4Q96DX8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTP4Q96DX8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 AL136172.1-201ENST00000598590 1394 ntBASIC15.25■□□□□ 0.03
RTP4Q96DX8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 RN7SL837P-201ENST00000463010 287 ntBASIC15.25■□□□□ 0.03
RTP4Q96DX8 MESTP3-201ENST00000503460 968 ntBASIC15.25■□□□□ 0.03
RTP4Q96DX8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms