Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 AC023310.1-201ENST00000554836 735 ntBASIC13.34□□□□□ -0.27
APH1AQ96BI3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 AL008721.1-201ENST00000609964 604 ntBASIC13.34□□□□□ -0.27
APH1AQ96BI3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.34□□□□□ -0.27
APH1AQ96BI3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 AHCYP2-201ENST00000430630 1300 ntBASIC13.34□□□□□ -0.27
APH1AQ96BI3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1AQ96BI3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1AQ96BI3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
APH1AQ96BI3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.33□□□□□ -0.27
APH1AQ96BI3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
APH1AQ96BI3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 POM121L8P-201ENST00000417732 1281 ntBASIC13.33□□□□□ -0.28
APH1AQ96BI3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 POM121L9P-203ENST00000441984 1285 ntBASIC13.33□□□□□ -0.28
APH1AQ96BI3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AC144831.1-201ENST00000573312 2656 ntBASIC13.33□□□□□ -0.28
APH1AQ96BI3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1AQ96BI3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APH1AQ96BI3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1AQ96BI3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1AQ96BI3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APH1AQ96BI3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.32□□□□□ -0.28
APH1AQ96BI3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.32□□□□□ -0.28
APH1AQ96BI3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1AQ96BI3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
APH1AQ96BI3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1AQ96BI3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
APH1AQ96BI3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APH1AQ96BI3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms