Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 AP000593.2-201ENST00000542775 1433 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC015802.1-201ENST00000588104 1449 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 AL136172.1-201ENST00000598590 1394 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 INE2-201ENST00000630399 1874 ntBASIC13.19□□□□□ -0.3
TMEM54Q969K7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 ARSEP1-201ENST00000420443 635 ntBASIC13.19□□□□□ -0.3
TMEM54Q969K7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 GAPDHP21-201ENST00000450301 1010 ntBASIC13.19□□□□□ -0.3
TMEM54Q969K7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AC006453.4-201ENST00000636949 1252 ntBASIC13.19□□□□□ -0.3
TMEM54Q969K7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM54Q969K7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM54Q969K7 AC020910.5-201ENST00000623668 1865 ntBASIC13.19□□□□□ -0.3
TMEM54Q969K7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 AC007191.1-201ENST00000623179 2995 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 AGGF1P1-201ENST00000509500 2073 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms