Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC120045.2-201ENST00000567334 178 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 RN7SL48P-201ENST00000579283 293 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 CU634019.7-201ENST00000624153 1185 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 FP236241.2-201ENST00000624906 1185 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AC123912.3-201ENST00000600907 1367 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 OR8S1-201ENST00000310194 1080 ntBASIC15.35■□□□□ 0.05
PTCD2Q8WV60 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 CAB39P1-201ENST00000502277 460 ntBASIC15.35■□□□□ 0.05
PTCD2Q8WV60 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 AC133539.2-201ENST00000604757 467 ntBASIC15.35■□□□□ 0.05
PTCD2Q8WV60 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.35■□□□□ 0.05
PTCD2Q8WV60 KRT8P22-201ENST00000562317 1415 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 ARSEP1-201ENST00000420443 635 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 EAF2-202ENST00000451944 960 ntTSL 2 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 CROCCP4-201ENST00000457096 498 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 USP32P1-208ENST00000506594 1164 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 CLUHP6-201ENST00000580789 941 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AL357094.1-201ENST00000603845 844 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms