Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 AC023090.2-201ENST00000625182 2110 ntBASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.83■□□□□ 0.12
SCN4BQ8IWT1 AC011270.2-201ENST00000624293 2550 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 OR2I1P-209ENST00000641730 5365 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AL136309.1-201ENST00000403917 691 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AC022494.1-201ENST00000466044 728 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AL022328.3-201ENST00000607943 679 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AP001002.3-201ENST00000623482 206 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AC022532.1-201ENST00000624563 1728 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCN4BQ8IWT1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 RN7SKP175-201ENST00000408472 289 ntBASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 CHMP1AP1-201ENST00000445563 662 ntBASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AP000593.2-201ENST00000542775 1433 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms