Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CCDC141Q6ZP82 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 AC138701.2-201ENST00000553634 226 ntBASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC141Q6ZP82 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 HLA-DMA-203ENST00000395305 777 ntBASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 AC073869.2-201ENST00000417338 1026 ntBASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 MIR2392-201ENST00000584881 84 ntBASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 AL132780.4-201ENST00000624870 1135 ntBASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC141Q6ZP82 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 AL354861.1-201ENST00000445213 355 ntBASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 MIR3180-2-201ENST00000581748 88 ntBASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 AL109954.1-202ENST00000564051 2148 ntBASIC21.83■■□□□ 1.09
CCDC141Q6ZP82 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC141Q6ZP82 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 PGR-210ENST00000619228 3038 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC141Q6ZP82 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms