Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
FOXC1Q12948 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 ACTG1P19-201ENST00000418987 1116 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 HLA-DPA2-205ENST00000433582 733 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 ERP29P1-201ENST00000442902 706 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXC1Q12948 AL135901.1-201ENST00000451812 333 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 AC083801.1-201ENST00000491689 358 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXC1Q12948 TREHP1-201ENST00000531328 465 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXC1Q12948 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 AC140113.1-201ENST00000603467 169 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 AC108673.2-201ENST00000608909 565 ntBASIC14.01□□□□□ -0.17
FOXC1Q12948 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FOXC1Q12948 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
FOXC1Q12948 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14□□□□□ -0.17
FOXC1Q12948 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 ILF3-AS1-201ENST00000591501 1983 ntBASIC14□□□□□ -0.17
FOXC1Q12948 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FOXC1Q12948 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14□□□□□ -0.17
FOXC1Q12948 KRT17P5-201ENST00000332088 839 ntBASIC14□□□□□ -0.17
FOXC1Q12948 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 AL512306.1-201ENST00000432698 848 ntBASIC14□□□□□ -0.17
FOXC1Q12948 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14□□□□□ -0.17
FOXC1Q12948 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 AC026470.1-201ENST00000478038 846 ntBASIC14□□□□□ -0.17
FOXC1Q12948 RN7SL530P-201ENST00000485097 298 ntBASIC14□□□□□ -0.17
FOXC1Q12948 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14□□□□□ -0.17
FOXC1Q12948 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 AC007952.4-201ENST00000573866 637 ntBASIC14□□□□□ -0.17
FOXC1Q12948 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
FOXC1Q12948 MIR6746-201ENST00000620971 63 ntBASIC14□□□□□ -0.17
FOXC1Q12948 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14□□□□□ -0.17
FOXC1Q12948 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FOXC1Q12948 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXC1Q12948 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14□□□□□ -0.17
FOXC1Q12948 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
FOXC1Q12948 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXC1Q12948 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXC1Q12948 AC127383.1-201ENST00000444697 1800 ntBASIC13.99□□□□□ -0.17
FOXC1Q12948 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXC1Q12948 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXC1Q12948 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms