Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
DDR1Q08345 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.32■□□□□ 0.52
DDR1Q08345 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
DDR1Q08345 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.31■□□□□ 0.52
DDR1Q08345 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.31■□□□□ 0.52
DDR1Q08345 OR6D1P-202ENST00000641007 5290 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.31■□□□□ 0.52
DDR1Q08345 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.31■□□□□ 0.52
DDR1Q08345 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DDR1Q08345 BCAS2P2-201ENST00000425064 674 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 PSMD4P1-201ENST00000433951 1109 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.31■□□□□ 0.52
DDR1Q08345 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 AC024293.1-201ENST00000467930 498 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 RN7SL530P-201ENST00000485097 298 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.31■□□□□ 0.52
DDR1Q08345 AL118516.1-201ENST00000564152 670 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.31■□□□□ 0.52
DDR1Q08345 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.31■□□□□ 0.52
DDR1Q08345 AC011247.3-201ENST00000603297 438 ntBASIC18.31■□□□□ 0.52
DDR1Q08345 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.31■□□□□ 0.52
DDR1Q08345 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DDR1Q08345 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.31■□□□□ 0.52
DDR1Q08345 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDR1Q08345 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
DDR1Q08345 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 AL590440.2-201ENST00000641973 1595 ntBASIC18.3■□□□□ 0.52
DDR1Q08345 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.3■□□□□ 0.52
DDR1Q08345 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DDR1Q08345 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
DDR1Q08345 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 AC002472.4-201ENST00000641915 272 ntBASIC18.3■□□□□ 0.52
DDR1Q08345 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.3■□□□□ 0.52
DDR1Q08345 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.3■□□□□ 0.52
DDR1Q08345 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
DDR1Q08345 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDR1Q08345 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDR1Q08345 PCDHA1-201ENST00000378133 2726 ntBASIC18.29■□□□□ 0.52
DDR1Q08345 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
DDR1Q08345 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDR1Q08345 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
DDR1Q08345 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
DDR1Q08345 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
DDR1Q08345 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDR1Q08345 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDR1Q08345 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.29■□□□□ 0.52
DDR1Q08345 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDR1Q08345 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.29■□□□□ 0.52
DDR1Q08345 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.29■□□□□ 0.52
DDR1Q08345 AL512306.1-201ENST00000432698 848 ntBASIC18.29■□□□□ 0.52
DDR1Q08345 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.29■□□□□ 0.52
DDR1Q08345 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.29■□□□□ 0.52
DDR1Q08345 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.29■□□□□ 0.52
DDR1Q08345 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.29■□□□□ 0.52
DDR1Q08345 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDR1Q08345 AC012073.1-201ENST00000606114 1108 ntBASIC18.29■□□□□ 0.52
DDR1Q08345 AC073592.2-201ENST00000623062 780 ntBASIC18.29■□□□□ 0.52
DDR1Q08345 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.29■□□□□ 0.52
DDR1Q08345 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms