Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KRT8P35-201ENST00000483942 1338 ntBASIC14.51□□□□□ -0.09
PCDH1Q08174 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH1Q08174 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDH1Q08174 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 DGCR5-201ENST00000399539 862 ntBASIC14.51□□□□□ -0.09
PCDH1Q08174 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDH1Q08174 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 WASH4P-201ENST00000564273 1246 ntBASIC14.51□□□□□ -0.09
PCDH1Q08174 AC138761.1-201ENST00000584393 385 ntBASIC14.51□□□□□ -0.09
PCDH1Q08174 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDH1Q08174 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 AC005912.2-201ENST00000619492 2400 ntBASIC14.51□□□□□ -0.09
PCDH1Q08174 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AC015802.1-201ENST00000588104 1449 ntBASIC14.5□□□□□ -0.09
PCDH1Q08174 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 AC012441.1-201ENST00000446669 685 ntBASIC14.5□□□□□ -0.09
PCDH1Q08174 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDH1Q08174 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AL354702.1-201ENST00000442006 1960 ntBASIC14.5□□□□□ -0.09
PCDH1Q08174 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH1Q08174 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 AC003102.2-201ENST00000589195 1469 ntBASIC14.5□□□□□ -0.09
PCDH1Q08174 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH1Q08174 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH1Q08174 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDH1Q08174 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDH1Q08174 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 AL138725.1-201ENST00000407347 1314 ntBASIC14.49□□□□□ -0.09
PCDH1Q08174 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PCDH1Q08174 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 BAATP1-201ENST00000412284 1225 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms