Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.6□□□□□ -0.07
PDX1P52945 AC044849.1-201ENST00000519737 1188 ntBASIC14.6□□□□□ -0.07
PDX1P52945 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 AC005730.2-201ENST00000564549 1184 ntBASIC14.6□□□□□ -0.07
PDX1P52945 MIR3619-201ENST00000579667 83 ntBASIC14.6□□□□□ -0.07
PDX1P52945 NDUFV2P1-201ENST00000596415 907 ntBASIC14.6□□□□□ -0.07
PDX1P52945 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PDX1P52945 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PDX1P52945 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PDX1P52945 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 NKAIN1P1-201ENST00000435754 582 ntBASIC14.59□□□□□ -0.07
PDX1P52945 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.59□□□□□ -0.07
PDX1P52945 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 HIST2H2BB-201ENST00000449108 381 ntBASIC14.59□□□□□ -0.07
PDX1P52945 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 AL391280.1-201ENST00000506969 1062 ntBASIC14.59□□□□□ -0.07
PDX1P52945 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 AC079328.1-201ENST00000560358 952 ntBASIC14.59□□□□□ -0.07
PDX1P52945 AC106820.3-201ENST00000561653 397 ntBASIC14.59□□□□□ -0.07
PDX1P52945 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.59□□□□□ -0.07
PDX1P52945 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PDX1P52945 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 AC007663.3-201ENST00000609632 465 ntBASIC14.59□□□□□ -0.07
PDX1P52945 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.59□□□□□ -0.07
PDX1P52945 AC015967.2-201ENST00000624092 234 ntBASIC14.59□□□□□ -0.07
PDX1P52945 AC006435.4-201ENST00000625037 234 ntBASIC14.59□□□□□ -0.07
PDX1P52945 AL356737.1-201ENST00000634391 234 ntBASIC14.59□□□□□ -0.07
PDX1P52945 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
PDX1P52945 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 AC091951.1-201ENST00000512854 2465 ntBASIC14.59□□□□□ -0.07
PDX1P52945 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PDX1P52945 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.59□□□□□ -0.07
PDX1P52945 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDX1P52945 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PDX1P52945 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.58□□□□□ -0.07
PDX1P52945 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PDX1P52945 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDX1P52945 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
PDX1P52945 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.58□□□□□ -0.07
PDX1P52945 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDX1P52945 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDX1P52945 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PDX1P52945 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.58□□□□□ -0.08
PDX1P52945 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms