Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 AC073957.3-201ENST00000609998 6758 ntBASIC11.95□□□□□ -0.5
CDC34P49427 AC105206.1-202ENST00000314927 2368 ntBASIC11.95□□□□□ -0.5
CDC34P49427 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC34P49427 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 AC104457.1-201ENST00000401024 814 ntBASIC11.95□□□□□ -0.5
CDC34P49427 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC34P49427 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC34P49427 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CDC34P49427 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CDC34P49427 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC34P49427 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC34P49427 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.95□□□□□ -0.5
CDC34P49427 AC099522.2-201ENST00000607001 744 ntBASIC11.95□□□□□ -0.5
CDC34P49427 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC34P49427 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC34P49427 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.95□□□□□ -0.5
CDC34P49427 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC34P49427 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
CDC34P49427 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CDC34P49427 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 KRT8P24-201ENST00000560290 1559 ntBASIC11.94□□□□□ -0.5
CDC34P49427 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.94□□□□□ -0.5
CDC34P49427 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.94□□□□□ -0.5
CDC34P49427 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 AC148477.8-201ENST00000624298 468 ntBASIC11.94□□□□□ -0.5
CDC34P49427 AC027612.1-201ENST00000445234 2395 ntBASIC11.94□□□□□ -0.5
CDC34P49427 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC34P49427 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CDC34P49427 AL354702.1-201ENST00000442006 1960 ntBASIC11.94□□□□□ -0.5
CDC34P49427 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC34P49427 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms