Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.6□□□□□ -0.23
APOBEC1P41238 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 AC012645.4-201ENST00000610691 1061 ntBASIC13.6□□□□□ -0.23
APOBEC1P41238 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APOBEC1P41238 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APOBEC1P41238 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 SALL4P5-201ENST00000419001 1760 ntBASIC13.6□□□□□ -0.23
APOBEC1P41238 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 FAM45BP-202ENST00000592932 1624 ntBASIC13.6□□□□□ -0.23
APOBEC1P41238 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.59□□□□□ -0.23
APOBEC1P41238 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.59□□□□□ -0.23
APOBEC1P41238 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 MESTP3-201ENST00000503460 968 ntBASIC13.59□□□□□ -0.23
APOBEC1P41238 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.59□□□□□ -0.23
APOBEC1P41238 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 GNRHR2-203ENST00000581100 1187 ntBASIC13.59□□□□□ -0.23
APOBEC1P41238 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.59□□□□□ -0.23
APOBEC1P41238 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOBEC1P41238 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOBEC1P41238 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOBEC1P41238 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOBEC1P41238 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.58□□□□□ -0.23
APOBEC1P41238 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.58□□□□□ -0.23
APOBEC1P41238 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APOBEC1P41238 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APOBEC1P41238 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
APOBEC1P41238 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APOBEC1P41238 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOBEC1P41238 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.58□□□□□ -0.24
APOBEC1P41238 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOBEC1P41238 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOBEC1P41238 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOBEC1P41238 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.58□□□□□ -0.24
APOBEC1P41238 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOBEC1P41238 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
APOBEC1P41238 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APOBEC1P41238 AC007292.2-201ENST00000593524 1812 ntBASIC13.58□□□□□ -0.24
APOBEC1P41238 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms