Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HADHAP40939 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.25■□□□□ 0.03
HADHAP40939 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.25■□□□□ 0.03
HADHAP40939 AC114812.1-204ENST00000449669 728 ntBASIC15.25■□□□□ 0.03
HADHAP40939 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
HADHAP40939 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.25■□□□□ 0.03
HADHAP40939 AC012645.4-201ENST00000610691 1061 ntBASIC15.25■□□□□ 0.03
HADHAP40939 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HADHAP40939 WFDC1-204ENST00000613603 549 ntBASIC15.25■□□□□ 0.03
HADHAP40939 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.25■□□□□ 0.03
HADHAP40939 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.25■□□□□ 0.03
HADHAP40939 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HADHAP40939 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.25■□□□□ 0.03
HADHAP40939 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.25■□□□□ 0.03
HADHAP40939 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HADHAP40939 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
HADHAP40939 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HADHAP40939 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.25■□□□□ 0.03
HADHAP40939 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HADHAP40939 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.24■□□□□ 0.03
HADHAP40939 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HADHAP40939 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HADHAP40939 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 ACKR1-201ENST00000368121 1240 ntBASIC15.24■□□□□ 0.03
HADHAP40939 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HADHAP40939 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HADHAP40939 AC005034.1-201ENST00000426657 489 ntBASIC15.24■□□□□ 0.03
HADHAP40939 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HADHAP40939 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.24■□□□□ 0.03
HADHAP40939 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.24■□□□□ 0.03
HADHAP40939 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.24■□□□□ 0.03
HADHAP40939 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.24■□□□□ 0.03
HADHAP40939 AP005019.2-201ENST00000615104 511 ntBASIC15.24■□□□□ 0.03
HADHAP40939 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.24■□□□□ 0.03
HADHAP40939 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.24■□□□□ 0.03
HADHAP40939 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 CU634019.7-201ENST00000624153 1185 ntBASIC15.24■□□□□ 0.03
HADHAP40939 FP236241.2-201ENST00000624906 1185 ntBASIC15.24■□□□□ 0.03
HADHAP40939 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 AL033527.5-201ENST00000641382 801 ntBASIC15.24■□□□□ 0.03
HADHAP40939 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 MTHFR-210ENST00000641407 2387 ntBASIC15.24■□□□□ 0.03
HADHAP40939 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HADHAP40939 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HADHAP40939 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HADHAP40939 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HADHAP40939 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 ST20-AS1-201ENST00000560255 4223 ntBASIC15.23■□□□□ 0.03
HADHAP40939 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 AC098614.1-201ENST00000368528 745 ntBASIC15.23■□□□□ 0.03
HADHAP40939 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.23■□□□□ 0.03
HADHAP40939 AL139094.1-201ENST00000405549 1188 ntBASIC15.23■□□□□ 0.03
HADHAP40939 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.23■□□□□ 0.03
HADHAP40939 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.23■□□□□ 0.03
HADHAP40939 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms