Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40P25942 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD40P25942 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CD40P25942 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40P25942 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 PCDHA3-202ENST00000532566 4594 ntBASIC12.93□□□□□ -0.34
CD40P25942 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CD40P25942 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40P25942 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.93□□□□□ -0.34
CD40P25942 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 RN7SKP230-201ENST00000365642 335 ntBASIC12.93□□□□□ -0.34
CD40P25942 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40P25942 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.93□□□□□ -0.34
CD40P25942 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.93□□□□□ -0.34
CD40P25942 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.93□□□□□ -0.34
CD40P25942 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 AC004898.1-201ENST00000451057 766 ntBASIC12.93□□□□□ -0.34
CD40P25942 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40P25942 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CD40P25942 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CD40P25942 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.93□□□□□ -0.34
CD40P25942 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 AC103810.3-201ENST00000583567 96 ntBASIC12.93□□□□□ -0.34
CD40P25942 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 AL358472.3-201ENST00000608147 415 ntBASIC12.93□□□□□ -0.34
CD40P25942 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40P25942 AL136301.1-201ENST00000615830 422 ntBASIC12.93□□□□□ -0.34
CD40P25942 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40P25942 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CD40P25942 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40P25942 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40P25942 AC073347.1-201ENST00000421633 2643 ntBASIC12.92□□□□□ -0.34
CD40P25942 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
CD40P25942 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40P25942 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CD40P25942 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 AC003102.2-201ENST00000589195 1469 ntBASIC12.92□□□□□ -0.34
CD40P25942 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40P25942 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 AC009093.2-202ENST00000620513 2079 ntBASIC12.92□□□□□ -0.34
CD40P25942 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CD40P25942 AL354877.1-201ENST00000424412 413 ntBASIC12.92□□□□□ -0.34
CD40P25942 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CD40P25942 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40P25942 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.92□□□□□ -0.34
CD40P25942 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.92□□□□□ -0.34
CD40P25942 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40P25942 MIR3615-201ENST00000581999 87 ntBASIC12.92□□□□□ -0.34
CD40P25942 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.92□□□□□ -0.34
CD40P25942 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
CD40P25942 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.92□□□□□ -0.34
CD40P25942 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.92□□□□□ -0.34
CD40P25942 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms