Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBB4AP04350 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TUBB4AP04350 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TUBB4AP04350 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBB4AP04350 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBB4AP04350 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBB4AP04350 MYADML-201ENST00000474610 2147 ntBASIC16.15■□□□□ 0.18
TUBB4AP04350 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TUBB4AP04350 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBB4AP04350 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
TUBB4AP04350 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.14■□□□□ 0.18
TUBB4AP04350 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TUBB4AP04350 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TUBB4AP04350 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBB4AP04350 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TUBB4AP04350 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBB4AP04350 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TUBB4AP04350 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.14■□□□□ 0.17
TUBB4AP04350 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TUBB4AP04350 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBB4AP04350 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.14■□□□□ 0.17
TUBB4AP04350 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 AC074386.1-202ENST00000463561 864 ntBASIC16.14■□□□□ 0.17
TUBB4AP04350 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.14■□□□□ 0.17
TUBB4AP04350 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBB4AP04350 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 FAM215A-202ENST00000632077 792 ntBASIC16.14■□□□□ 0.17
TUBB4AP04350 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBB4AP04350 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
TUBB4AP04350 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.13■□□□□ 0.17
TUBB4AP04350 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 RNA5SP419-201ENST00000515908 135 ntBASIC16.13■□□□□ 0.17
TUBB4AP04350 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 FAM86C2P-203ENST00000528684 1004 ntBASIC16.13■□□□□ 0.17
TUBB4AP04350 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.13■□□□□ 0.17
TUBB4AP04350 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.13■□□□□ 0.17
TUBB4AP04350 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.13■□□□□ 0.17
TUBB4AP04350 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBB4AP04350 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TUBB4AP04350 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBB4AP04350 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBB4AP04350 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBB4AP04350 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms