Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 AC002056.1-201ENST00000395613 760 ntBASIC13.94□□□□□ -0.18
CLIC3O95833 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.94□□□□□ -0.18
CLIC3O95833 HIST3H2BA-201ENST00000436555 524 ntBASIC13.94□□□□□ -0.18
CLIC3O95833 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.94□□□□□ -0.18
CLIC3O95833 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 AC079776.4-201ENST00000511039 504 ntBASIC13.94□□□□□ -0.18
CLIC3O95833 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.94□□□□□ -0.18
CLIC3O95833 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.94□□□□□ -0.18
CLIC3O95833 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.94□□□□□ -0.18
CLIC3O95833 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 AL157414.3-201ENST00000624276 1954 ntBASIC13.94□□□□□ -0.18
CLIC3O95833 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 AC018665.1-201ENST00000622927 1362 ntBASIC13.94□□□□□ -0.18
CLIC3O95833 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CLIC3O95833 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC3O95833 AC131212.3-201ENST00000624087 4219 ntBASIC13.94□□□□□ -0.18
CLIC3O95833 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.94□□□□□ -0.18
CLIC3O95833 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
CLIC3O95833 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.93□□□□□ -0.18
CLIC3O95833 RNA5SP415-201ENST00000517246 115 ntBASIC13.93□□□□□ -0.18
CLIC3O95833 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.93□□□□□ -0.18
CLIC3O95833 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.93□□□□□ -0.18
CLIC3O95833 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.93□□□□□ -0.18
CLIC3O95833 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 AL135744.1-201ENST00000565098 629 ntBASIC13.93□□□□□ -0.18
CLIC3O95833 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.93□□□□□ -0.18
CLIC3O95833 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CLIC3O95833 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.93□□□□□ -0.18
CLIC3O95833 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLIC3O95833 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms