Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.63□□□□□ -0.39
SIX6O95475 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 MIR193BHG-211ENST00000641433 5365 ntBASIC12.63□□□□□ -0.39
SIX6O95475 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 AGGF1P1-201ENST00000509500 2073 ntBASIC12.63□□□□□ -0.39
SIX6O95475 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SIX6O95475 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
SIX6O95475 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.63□□□□□ -0.39
SIX6O95475 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SIX6O95475 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 LILRP1-201ENST00000444199 1370 ntBASIC12.62□□□□□ -0.39
SIX6O95475 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 PCED1CP-201ENST00000419887 785 ntBASIC12.62□□□□□ -0.39
SIX6O95475 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.62□□□□□ -0.39
SIX6O95475 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.62□□□□□ -0.39
SIX6O95475 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 FOXO1B-201ENST00000504678 1527 ntBASIC12.62□□□□□ -0.39
SIX6O95475 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SIX6O95475 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.62□□□□□ -0.39
SIX6O95475 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SIX6O95475 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms