Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX2-2O95096 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX2-2O95096 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NKX2-2O95096 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NKX2-2O95096 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX2-2O95096 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 AP001267.2-201ENST00000532619 2086 ntBASIC13.84□□□□□ -0.19
NKX2-2O95096 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NKX2-2O95096 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-2O95096 AC011840.2-201ENST00000563063 1520 ntBASIC13.84□□□□□ -0.19
NKX2-2O95096 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-2O95096 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-2O95096 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-2O95096 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-2O95096 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-2O95096 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 AC092135.3-201ENST00000624151 1846 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-2O95096 AC015802.1-201ENST00000588104 1449 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX2-2O95096 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-2O95096 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 AGGF1P1-201ENST00000509500 2073 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NKX2-2O95096 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX2-2O95096 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-2O95096 AC016694.1-201ENST00000434179 700 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 GCOM2-201ENST00000509133 1104 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 AC022447.6-201ENST00000515522 438 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 AC005225.4-201ENST00000557330 545 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX2-2O95096 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX2-2O95096 LINC02084-201ENST00000606069 1096 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-2O95096 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NKX2-2O95096 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-2O95096 FKBP4P6-201ENST00000457486 1332 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 MRPL37P1-201ENST00000592451 1337 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NKX2-2O95096 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX2-2O95096 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-2O95096 AL136172.1-201ENST00000598590 1394 ntBASIC13.83□□□□□ -0.2
NKX2-2O95096 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-2O95096 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NKX2-2O95096 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NKX2-2O95096 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX2-2O95096 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 AP000593.2-201ENST00000542775 1433 ntBASIC13.82□□□□□ -0.2
NKX2-2O95096 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NKX2-2O95096 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.82□□□□□ -0.2
NKX2-2O95096 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NKX2-2O95096 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NKX2-2O95096 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 CD8B2-202ENST00000417670 633 ntBASIC13.82□□□□□ -0.2
NKX2-2O95096 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 AL391280.1-201ENST00000506969 1062 ntBASIC13.82□□□□□ -0.2
NKX2-2O95096 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.82□□□□□ -0.2
NKX2-2O95096 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.82□□□□□ -0.2
NKX2-2O95096 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.82□□□□□ -0.2
NKX2-2O95096 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX2-2O95096 ECM1P1-201ENST00000604092 1279 ntBASIC13.82□□□□□ -0.2
NKX2-2O95096 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms