Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.09□□□□□ -0.31
UPK1BO75841 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.09□□□□□ -0.31
UPK1BO75841 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 TPSP2-201ENST00000561760 610 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK1BO75841 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.09□□□□□ -0.31
UPK1BO75841 AC092329.2-201ENST00000598402 547 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 MTDHP4-201ENST00000600287 670 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 AC138894.3-201ENST00000603787 634 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 AL591684.3-201ENST00000605187 298 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UPK1BO75841 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
UPK1BO75841 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UPK1BO75841 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UPK1BO75841 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
UPK1BO75841 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
UPK1BO75841 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
UPK1BO75841 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UPK1BO75841 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UPK1BO75841 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.08□□□□□ -0.31
UPK1BO75841 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.08□□□□□ -0.31
UPK1BO75841 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
UPK1BO75841 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
UPK1BO75841 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.08□□□□□ -0.32
UPK1BO75841 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.08□□□□□ -0.32
UPK1BO75841 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.08□□□□□ -0.32
UPK1BO75841 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.08□□□□□ -0.32
UPK1BO75841 AL009183.1-201ENST00000603760 355 ntBASIC13.08□□□□□ -0.32
UPK1BO75841 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.08□□□□□ -0.32
UPK1BO75841 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.08□□□□□ -0.32
UPK1BO75841 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UPK1BO75841 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UPK1BO75841 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UPK1BO75841 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 AC134407.3-201ENST00000624035 2139 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms