Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PMPCBO75439 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PMPCBO75439 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PMPCBO75439 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PMPCBO75439 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.31■□□□□ 0.04
PMPCBO75439 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PMPCBO75439 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PMPCBO75439 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.3■□□□□ 0.04
PMPCBO75439 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 BAATP1-201ENST00000412284 1225 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PMPCBO75439 ACTG1P3-201ENST00000431775 1114 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.3■□□□□ 0.04
PMPCBO75439 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.3■□□□□ 0.04
PMPCBO75439 GIMAP3P-201ENST00000495150 836 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 AC011495.1-201ENST00000498085 584 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.3■□□□□ 0.04
PMPCBO75439 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 AC232323.1-201ENST00000540724 2099 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 PTP4A1P2-201ENST00000546033 454 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 AL596325.1-201ENST00000563991 1082 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 AC134312.5-201ENST00000568031 1313 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.3■□□□□ 0.04
PMPCBO75439 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.3■□□□□ 0.04
PMPCBO75439 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.3■□□□□ 0.04
PMPCBO75439 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.3■□□□□ 0.04
PMPCBO75439 AC099063.4-201ENST00000641099 1602 ntBASIC15.3■□□□□ 0.04
PMPCBO75439 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PMPCBO75439 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PMPCBO75439 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PMPCBO75439 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
PMPCBO75439 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.29■□□□□ 0.04
PMPCBO75439 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.29■□□□□ 0.04
PMPCBO75439 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.29■□□□□ 0.04
PMPCBO75439 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PMPCBO75439 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 INE1-201ENST00000456273 945 ntBASIC15.29■□□□□ 0.04
PMPCBO75439 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.29■□□□□ 0.04
PMPCBO75439 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.29■□□□□ 0.04
PMPCBO75439 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.29■□□□□ 0.04
PMPCBO75439 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.29■□□□□ 0.04
PMPCBO75439 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.29■□□□□ 0.04
PMPCBO75439 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PMPCBO75439 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PMPCBO75439 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms