Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.48□□□□□ -0.25
ZIC3O60481 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC3O60481 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ZIC3O60481 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ZIC3O60481 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 BTBD6P1-201ENST00000412176 1267 ntBASIC13.47□□□□□ -0.25
ZIC3O60481 AC079178.1-201ENST00000420915 656 ntBASIC13.47□□□□□ -0.25
ZIC3O60481 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ZIC3O60481 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ZIC3O60481 AC092658.1-201ENST00000505836 891 ntBASIC13.47□□□□□ -0.25
ZIC3O60481 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.47□□□□□ -0.25
ZIC3O60481 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
ZIC3O60481 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.47□□□□□ -0.25
ZIC3O60481 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ZIC3O60481 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.47□□□□□ -0.25
ZIC3O60481 MIR6799-201ENST00000620297 69 ntBASIC13.47□□□□□ -0.25
ZIC3O60481 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 AP001002.3-201ENST00000623482 206 ntBASIC13.47□□□□□ -0.25
ZIC3O60481 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.47□□□□□ -0.25
ZIC3O60481 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC3O60481 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC3O60481 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ZIC3O60481 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC3O60481 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC3O60481 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ZIC3O60481 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC013726.1-201ENST00000563747 2285 ntBASIC13.46□□□□□ -0.25
ZIC3O60481 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 FAM86MP-201ENST00000340703 885 ntBASIC13.46□□□□□ -0.25
ZIC3O60481 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 BRWD1P1-201ENST00000401091 371 ntBASIC13.46□□□□□ -0.25
ZIC3O60481 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.46□□□□□ -0.25
ZIC3O60481 AL591846.1-201ENST00000451736 433 ntBASIC13.46□□□□□ -0.25
ZIC3O60481 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 AL136301.1-201ENST00000615830 422 ntBASIC13.46□□□□□ -0.25
ZIC3O60481 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC3O60481 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC3O60481 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ZIC3O60481 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ZIC3O60481 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.46□□□□□ -0.26
ZIC3O60481 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ZIC3O60481 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ZIC3O60481 AC063926.3-201ENST00000624734 5658 ntBASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms