Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ACTBP8-201ENST00000403258 1108 ntBASIC15.23■□□□□ 0.03
AP3B1O00203 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.23■□□□□ 0.03
AP3B1O00203 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.23■□□□□ 0.03
AP3B1O00203 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.23■□□□□ 0.03
AP3B1O00203 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.23■□□□□ 0.03
AP3B1O00203 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
AP3B1O00203 AL359711.2-201ENST00000563105 872 ntBASIC15.23■□□□□ 0.03
AP3B1O00203 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.23■□□□□ 0.03
AP3B1O00203 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.23■□□□□ 0.03
AP3B1O00203 MIR8072-201ENST00000614241 80 ntBASIC15.23■□□□□ 0.03
AP3B1O00203 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.23■□□□□ 0.03
AP3B1O00203 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
AP3B1O00203 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
AP3B1O00203 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 AC026748.1-201ENST00000624349 3251 ntBASIC15.23■□□□□ 0.03
AP3B1O00203 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3B1O00203 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP3B1O00203 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
AP3B1O00203 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 AC007541.1-201ENST00000570282 1469 ntBASIC15.22■□□□□ 0.03
AP3B1O00203 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
AP3B1O00203 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 RNU1-114P-201ENST00000365297 166 ntBASIC15.22■□□□□ 0.03
AP3B1O00203 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 MIR770-201ENST00000390219 98 ntBASIC15.22■□□□□ 0.03
AP3B1O00203 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 AC007969.1-201ENST00000433675 447 ntBASIC15.22■□□□□ 0.03
AP3B1O00203 AL162726.2-201ENST00000438986 1017 ntBASIC15.22■□□□□ 0.03
AP3B1O00203 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 AP001063.1-201ENST00000568332 529 ntBASIC15.22■□□□□ 0.03
AP3B1O00203 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.22■□□□□ 0.03
AP3B1O00203 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 CICP4-201ENST00000447359 2812 ntBASIC15.22■□□□□ 0.03
AP3B1O00203 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3B1O00203 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3B1O00203 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3B1O00203 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 MYCLP2-201ENST00000449268 967 ntBASIC15.21■□□□□ 0.03
AP3B1O00203 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms