Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 MIR1247-201ENST00000408206 136 ntBASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 MIR663B-201ENST00000408361 115 ntBASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC100850.1-201ENST00000506768 649 ntBASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AP001258.2-201ENST00000529891 490 ntBASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC002472.3-201ENST00000640124 621 ntBASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC00588Q9Y4M8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 AL109954.1-202ENST00000564051 2148 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 AC023090.2-201ENST00000625182 2110 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 GPAA1P2-201ENST00000417923 928 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 POM121L10P-201ENST00000436994 1285 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 MIR3615-201ENST00000581999 87 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 AL136301.1-201ENST00000615830 422 ntBASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms