Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AC139749.1-202ENST00000617529 3139 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AL138799.1-201ENST00000448213 1675 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AC131212.3-201ENST00000624087 4219 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 LILRP1-201ENST00000444199 1370 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 MIR770-201ENST00000390219 98 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 GNAQP1-201ENST00000444815 1067 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 GAPDHP40-201ENST00000505218 1006 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AC026410.3-201ENST00000514280 936 ntBASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC68Q9H2F9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 AL645937.2-201ENST00000396808 931 ntBASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 NUS1P3-201ENST00000423502 862 ntBASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 AC134915.1-201ENST00000426461 574 ntBASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms