Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 AC093004.1-201ENST00000508850 424 ntBASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 AC055876.2-201ENST00000531834 546 ntBASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 AC018665.1-201ENST00000622927 1362 ntBASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF3BQ9BZI7 KRT8P14-201ENST00000414254 1442 ntBASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 MEP1AP4-201ENST00000423244 1087 ntBASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 NME2P1-201ENST00000426182 414 ntBASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 RRP7BP-205ENST00000566851 833 ntBASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 AC124283.3-201ENST00000570869 594 ntBASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 AC093813.1-201ENST00000605066 256 ntBASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF3BQ9BZI7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms