Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AC025271.4-201ENST00000621477 1726 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AC097065.1-201ENST00000425737 517 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AC079112.1-201ENST00000454972 939 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 TMCO5B-205ENST00000530020 894 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AC003686.1-201ENST00000550956 1034 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AC025262.2-201ENST00000623975 1056 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 AHCYP4-201ENST00000419201 1315 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 AL807761.2-201ENST00000422849 729 ntBASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 AC114947.1-202ENST00000514136 344 ntBASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 AP001184.1-201ENST00000637936 376 ntBASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTFDC1Q9BY42 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 AC013726.1-201ENST00000563747 2285 ntBASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 FTH1P22-201ENST00000456305 520 ntBASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 AC084781.1-201ENST00000613737 656 ntBASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RTFDC1Q9BY42 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms