Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 AL121723.1-201ENST00000445194 1519 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 KRT18P64-201ENST00000434946 1219 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 UGT1A2P-201ENST00000454886 866 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 TERF1P3-201ENST00000505638 1227 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 AC000095.1-201ENST00000603208 874 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 AL138828.2-201ENST00000615812 383 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 AC073592.8-201ENST00000624126 511 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 CICP11-201ENST00000434745 2827 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 AC002472.2-201ENST00000442739 958 ntBASIC13.8□□□□□ -0.2
SNX18Q96RF0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 AC097493.3-201ENST00000509725 367 ntBASIC13.8□□□□□ -0.2
SNX18Q96RF0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 ACE3P-201ENST00000423435 1973 ntBASIC13.8□□□□□ -0.2
SNX18Q96RF0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX18Q96RF0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX18Q96RF0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX18Q96RF0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms