Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 AC104457.1-201ENST00000401024 814 ntBASIC14.28□□□□□ -0.12
COL21A1Q96P44 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 BEND3P1-201ENST00000421591 1944 ntBASIC14.28□□□□□ -0.12
COL21A1Q96P44 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 AC092552.1-201ENST00000547243 906 ntBASIC14.28□□□□□ -0.12
COL21A1Q96P44 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 SPDYE22P-201ENST00000582158 798 ntBASIC14.28□□□□□ -0.12
COL21A1Q96P44 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 TMEM261P1-201ENST00000604899 340 ntBASIC14.28□□□□□ -0.12
COL21A1Q96P44 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
COL21A1Q96P44 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL21A1Q96P44 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL21A1Q96P44 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COL21A1Q96P44 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL21A1Q96P44 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 AC098850.1-201ENST00000419919 790 ntBASIC14.27□□□□□ -0.13
COL21A1Q96P44 AL442647.2-201ENST00000429864 857 ntBASIC14.27□□□□□ -0.13
COL21A1Q96P44 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.27□□□□□ -0.13
COL21A1Q96P44 BRI3BPP1-201ENST00000594224 787 ntBASIC14.27□□□□□ -0.13
COL21A1Q96P44 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms