Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 AC023824.1-201ENST00000562945 2975 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 AC006480.2-201ENST00000609770 1337 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 ACTG1P2-201ENST00000415776 1125 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 ACTG1P11-201ENST00000425411 1125 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 MIR4313-201ENST00000580760 101 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 AP003419.4-201ENST00000616071 517 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 PRSS30P-206ENST00000641773 873 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 AC006486.2-201ENST00000624246 2199 ntBASIC17.59■□□□□ 0.41
TRIM47Q96LD4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM47Q96LD4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM47Q96LD4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM47Q96LD4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM47Q96LD4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.58■□□□□ 0.41
TRIM47Q96LD4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 RN7SL713P-201ENST00000582127 302 ntBASIC17.58■□□□□ 0.4
TRIM47Q96LD4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 AC073413.1-201ENST00000603927 732 ntBASIC17.58■□□□□ 0.4
TRIM47Q96LD4 AF254983.2-201ENST00000612331 135 ntBASIC17.58■□□□□ 0.4
TRIM47Q96LD4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRIM47Q96LD4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 LRRC59-203ENST00000576448 1531 ntBASIC17.57■□□□□ 0.4
TRIM47Q96LD4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms