Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AC104989.1-201ENST00000519711 778 ntBASIC11.27□□□□□ -0.61
RNF183Q96D59 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.27□□□□□ -0.61
RNF183Q96D59 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.27□□□□□ -0.61
RNF183Q96D59 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.27□□□□□ -0.61
RNF183Q96D59 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
RNF183Q96D59 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.27□□□□□ -0.61
RNF183Q96D59 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 AC133552.6-201ENST00000613406 534 ntBASIC11.27□□□□□ -0.61
RNF183Q96D59 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 AC005252.2-201ENST00000624630 1141 ntBASIC11.27□□□□□ -0.61
RNF183Q96D59 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 AC134312.5-201ENST00000568031 1313 ntBASIC11.27□□□□□ -0.61
RNF183Q96D59 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.27□□□□□ -0.61
RNF183Q96D59 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 AC117489.1-201ENST00000625169 3217 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.26□□□□□ -0.61
RNF183Q96D59 AC012441.1-201ENST00000446669 685 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 BCRP2-202ENST00000447763 634 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 GAPDHP40-201ENST00000505218 1006 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 BCRP6-201ENST00000510112 632 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 BCRP7-201ENST00000511549 544 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 AP001889.1-201ENST00000525414 633 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
RNF183Q96D59 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.26□□□□□ -0.61
RNF183Q96D59 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.26□□□□□ -0.61
RNF183Q96D59 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms