Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC138696.2-201ENST00000607376 223 ntBASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 AC023090.2-201ENST00000625182 2110 ntBASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 AC023157.3-201ENST00000619086 2088 ntBASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP6V0A1Q93050 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AC126177.1-201ENST00000547829 2218 ntBASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AL136309.1-201ENST00000403917 691 ntBASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 TLE1P1-201ENST00000422965 589 ntBASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 HIST2H2BB-201ENST00000449108 381 ntBASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 RHOQP1-201ENST00000555758 579 ntBASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AP001002.3-201ENST00000623482 206 ntBASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP6V0A1Q93050 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 AC091951.1-201ENST00000512854 2465 ntBASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 ACE3P-201ENST00000423435 1973 ntBASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 CHMP1AP1-201ENST00000445563 662 ntBASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
ATP6V0A1Q93050 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP6V0A1Q93050 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ATP6V0A1Q93050 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP6V0A1Q93050 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms