Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 AC020658.6-201ENST00000623564 1870 ntBASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 NKAIN1P1-201ENST00000435754 582 ntBASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 AC044849.1-201ENST00000519737 1188 ntBASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.77■□□□□ 0.12
SHKBP1Q8TBC3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
SHKBP1Q8TBC3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 AL354877.1-201ENST00000424412 413 ntBASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SERPINA13P-202ENST00000478994 924 ntBASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms