Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 ACTBP11-201ENST00000436287 1126 ntBASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 YBX1P6-201ENST00000442962 1002 ntBASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 AL355994.2-201ENST00000447882 704 ntBASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 AC025181.2-201ENST00000606994 802 ntBASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 KRT8P35-201ENST00000483942 1338 ntBASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 BRWD1P1-201ENST00000401091 371 ntBASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC026954.1-201ENST00000429771 1293 ntBASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC025279.2-201ENST00000569730 653 ntBASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 MIR4525-201ENST00000580000 75 ntBASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 MIR4538-201ENST00000581377 78 ntBASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 AC145423.3-201ENST00000615987 467 ntBASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDND2Q8NHS1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms