Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 AHCYP2-201ENST00000430630 1300 ntBASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 NORAD-201ENST00000565493 5339 ntBASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AC004945.1-201ENST00000416738 983 ntBASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 C2orf69P2-201ENST00000562032 1123 ntBASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AC007292.2-201ENST00000593524 1812 ntBASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AC073413.1-201ENST00000603927 732 ntBASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AC008687.7-202ENST00000637404 953 ntBASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZIC4Q8N9L1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AL354989.2-201ENST00000435838 1540 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms