Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AL162727.3-201ENST00000635661 2787 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 MST1L-201ENST00000442552 2185 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AC239868.1-201ENST00000369385 493 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 RPL8P2-201ENST00000430538 502 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 ALG1L13P-202ENST00000519320 584 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AC026803.1-201ENST00000569130 274 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 RPL17P45-201ENST00000586289 509 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AC004466.1-201ENST00000599515 1080 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 MIR6858-201ENST00000620733 67 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AC138466.4-201ENST00000623965 852 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AL161773.1-201ENST00000624845 863 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 AC138035.3-201ENST00000622706 2791 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 FAM90A2P-201ENST00000511144 1395 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 FAM90A25P-201ENST00000528404 1395 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OTOP1Q7RTM1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 AC092384.3-202ENST00000564646 2873 ntBASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 AL512430.1-201ENST00000392575 860 ntBASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 VDAC1P1-201ENST00000439229 848 ntBASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 RN7SL596P-201ENST00000582123 288 ntBASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms