Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 AC138696.2-201ENST00000607376 223 ntBASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AC007191.1-201ENST00000623179 2995 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 GAPDHP21-201ENST00000450301 1010 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AL391280.1-201ENST00000506969 1062 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 KRT90P-201ENST00000549264 1064 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AC132938.4-201ENST00000623835 848 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AC139749.1-202ENST00000617529 3139 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 AC020910.5-201ENST00000623668 1865 ntBASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN20Q4JDL3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 C2orf27AP3-201ENST00000434123 579 ntBASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 CROCCP4-201ENST00000457096 498 ntBASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AP003171.2-201ENST00000528208 925 ntBASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AC131206.1-201ENST00000538078 1211 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms