Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ALG3P1-201ENST00000508806 1114 ntBASIC15.62■□□□□ 0.09
EPHB3P54753 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
EPHB3P54753 AC009884.2-201ENST00000603110 324 ntBASIC15.62■□□□□ 0.09
EPHB3P54753 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.62■□□□□ 0.09
EPHB3P54753 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
EPHB3P54753 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
EPHB3P54753 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHB3P54753 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.62■□□□□ 0.09
EPHB3P54753 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.62■□□□□ 0.09
EPHB3P54753 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.62■□□□□ 0.09
EPHB3P54753 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHB3P54753 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHB3P54753 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHB3P54753 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.61■□□□□ 0.09
EPHB3P54753 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
EPHB3P54753 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 PUDPP3-201ENST00000445368 636 ntBASIC15.61■□□□□ 0.09
EPHB3P54753 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.61■□□□□ 0.09
EPHB3P54753 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 AC008805.1-201ENST00000590892 364 ntBASIC15.61■□□□□ 0.09
EPHB3P54753 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.61■□□□□ 0.09
EPHB3P54753 BX088702.1-201ENST00000610784 235 ntBASIC15.61■□□□□ 0.09
EPHB3P54753 AC091812.3-201ENST00000621362 345 ntBASIC15.61■□□□□ 0.09
EPHB3P54753 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
EPHB3P54753 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHB3P54753 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHB3P54753 AC244394.1-201ENST00000435000 1665 ntBASIC15.6■□□□□ 0.09
EPHB3P54753 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 PAUPAR-201ENST00000630360 2965 ntBASIC15.6■□□□□ 0.09
EPHB3P54753 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHB3P54753 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
EPHB3P54753 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHB3P54753 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHB3P54753 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.6■□□□□ 0.09
EPHB3P54753 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 RN7SL769P-201ENST00000469386 295 ntBASIC15.6■□□□□ 0.09
EPHB3P54753 RNA5SP423-201ENST00000517127 109 ntBASIC15.6■□□□□ 0.09
EPHB3P54753 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
EPHB3P54753 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 AC027601.3-201ENST00000622907 509 ntBASIC15.6■□□□□ 0.09
EPHB3P54753 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
EPHB3P54753 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHB3P54753 AL008718.2-201ENST00000609206 1313 ntBASIC15.6■□□□□ 0.09
EPHB3P54753 PCDHA3-202ENST00000532566 4594 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms