Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PPY2P-201ENST00000582808 702 ntBASIC14.62□□□□□ -0.07
PDX1P52945 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.62□□□□□ -0.07
PDX1P52945 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
PDX1P52945 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.62□□□□□ -0.07
PDX1P52945 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PDX1P52945 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 AC016700.1-201ENST00000429424 312 ntBASIC14.61□□□□□ -0.07
PDX1P52945 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.61□□□□□ -0.07
PDX1P52945 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 AC004066.1-201ENST00000502488 802 ntBASIC14.61□□□□□ -0.07
PDX1P52945 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.61□□□□□ -0.07
PDX1P52945 RN7SL713P-201ENST00000582127 302 ntBASIC14.61□□□□□ -0.07
PDX1P52945 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 OR10B1P-201ENST00000601666 907 ntBASIC14.61□□□□□ -0.07
PDX1P52945 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.61□□□□□ -0.07
PDX1P52945 AC244157.2-201ENST00000616239 1006 ntBASIC14.61□□□□□ -0.07
PDX1P52945 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.61□□□□□ -0.07
PDX1P52945 AC138627.1-207ENST00000641560 1006 ntBASIC14.61□□□□□ -0.07
PDX1P52945 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDX1P52945 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
PDX1P52945 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.61□□□□□ -0.07
PDX1P52945 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.6□□□□□ -0.07
PDX1P52945 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.6□□□□□ -0.07
PDX1P52945 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PDX1P52945 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.6□□□□□ -0.07
PDX1P52945 AL662890.1-201ENST00000396818 632 ntBASIC14.6□□□□□ -0.07
PDX1P52945 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.6□□□□□ -0.07
PDX1P52945 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.6□□□□□ -0.07
PDX1P52945 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.6□□□□□ -0.07
PDX1P52945 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDX1P52945 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.6□□□□□ -0.07
PDX1P52945 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.6□□□□□ -0.07
PDX1P52945 EIF4HP1-201ENST00000453115 687 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms