Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.43■□□□□ 0.22
CLCN3P51790 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 AC005740.2-201ENST00000511085 419 ntBASIC16.43■□□□□ 0.22
CLCN3P51790 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 BNIP3P13-201ENST00000599968 566 ntBASIC16.43■□□□□ 0.22
CLCN3P51790 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLCN3P51790 AL021578.1-201ENST00000613646 709 ntBASIC16.43■□□□□ 0.22
CLCN3P51790 AC138649.2-201ENST00000615886 705 ntBASIC16.43■□□□□ 0.22
CLCN3P51790 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLCN3P51790 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN3P51790 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN3P51790 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLCN3P51790 AC004899.1-201ENST00000424687 1714 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CLCN3P51790 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 KLF2P1-201ENST00000447438 1042 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 AC104073.2-201ENST00000453737 312 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN3P51790 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN3P51790 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLCN3P51790 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN3P51790 AC132192.2-201ENST00000596206 1147 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 CICP23-201ENST00000605013 2741 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN3P51790 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 AC007292.2-201ENST00000593524 1812 ntBASIC16.42■□□□□ 0.22
CLCN3P51790 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLCN3P51790 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CLCN3P51790 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CLCN3P51790 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN3P51790 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.41■□□□□ 0.22
CLCN3P51790 DPM3-202ENST00000368399 517 ntBASIC16.41■□□□□ 0.22
CLCN3P51790 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms