Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF144AP50876 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.08□□□□□ -0.16
RNF144AP50876 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.08□□□□□ -0.16
RNF144AP50876 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF144AP50876 API5-211ENST00000534695 560 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF144AP50876 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF144AP50876 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 LINC01230-201ENST00000625222 3017 ntBASIC14.08□□□□□ -0.16
RNF144AP50876 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
RNF144AP50876 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNF144AP50876 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNF144AP50876 C1QBPP1-201ENST00000400117 770 ntBASIC14.07□□□□□ -0.16
RNF144AP50876 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF144AP50876 GAPDHP40-201ENST00000505218 1006 ntBASIC14.07□□□□□ -0.16
RNF144AP50876 AC026410.3-201ENST00000514280 936 ntBASIC14.07□□□□□ -0.16
RNF144AP50876 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 AC120045.2-201ENST00000567334 178 ntBASIC14.07□□□□□ -0.16
RNF144AP50876 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.07□□□□□ -0.16
RNF144AP50876 AC093726.1-201ENST00000608064 963 ntBASIC14.07□□□□□ -0.16
RNF144AP50876 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 AL137783.1-201ENST00000623494 1896 ntBASIC14.07□□□□□ -0.16
RNF144AP50876 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNF144AP50876 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNF144AP50876 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF144AP50876 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF144AP50876 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF144AP50876 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms