Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC6A12P48065 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC6A12P48065 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 AC139749.1-202ENST00000617529 3139 ntBASIC14.46□□□□□ -0.09
SLC6A12P48065 INE2-201ENST00000630399 1874 ntBASIC14.46□□□□□ -0.09
SLC6A12P48065 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 MRPL37P1-201ENST00000592451 1337 ntBASIC14.46□□□□□ -0.09
SLC6A12P48065 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.46□□□□□ -0.09
SLC6A12P48065 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC6A12P48065 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.46□□□□□ -0.09
SLC6A12P48065 FTLP10-202ENST00000505798 471 ntBASIC14.46□□□□□ -0.09
SLC6A12P48065 SLC25A47P1-201ENST00000531577 414 ntBASIC14.46□□□□□ -0.09
SLC6A12P48065 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.46□□□□□ -0.09
SLC6A12P48065 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC6A12P48065 AC008735.3-201ENST00000596646 500 ntBASIC14.46□□□□□ -0.09
SLC6A12P48065 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC6A12P48065 AC132938.4-201ENST00000623835 848 ntBASIC14.46□□□□□ -0.09
SLC6A12P48065 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.46□□□□□ -0.09
SLC6A12P48065 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
SLC6A12P48065 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC6A12P48065 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SLC6A12P48065 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC6A12P48065 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC6A12P48065 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.46□□□□□ -0.1
SLC6A12P48065 AL136172.1-201ENST00000598590 1394 ntBASIC14.46□□□□□ -0.1
SLC6A12P48065 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC6A12P48065 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC6A12P48065 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC6A12P48065 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC6A12P48065 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
SLC6A12P48065 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC6A12P48065 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SLC6A12P48065 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SLC6A12P48065 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 AL512384.1-201ENST00000406683 331 ntBASIC14.45□□□□□ -0.1
SLC6A12P48065 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SLC6A12P48065 TMEM14DP-201ENST00000422205 345 ntBASIC14.45□□□□□ -0.1
SLC6A12P48065 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC6A12P48065 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 AL391280.1-201ENST00000506969 1062 ntBASIC14.45□□□□□ -0.1
SLC6A12P48065 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC6A12P48065 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC6A12P48065 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC6A12P48065 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 IGHV3-72-202ENST00000621503 303 ntBASIC14.45□□□□□ -0.1
SLC6A12P48065 AL358472.5-202ENST00000641448 1267 ntBASIC14.45□□□□□ -0.1
SLC6A12P48065 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC6A12P48065 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms