Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.34□□□□□ -0.43
CEACAM3P40198 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AL022328.1-201ENST00000610050 478 ntBASIC12.34□□□□□ -0.43
CEACAM3P40198 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
CEACAM3P40198 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AP000845.1-201ENST00000581677 2131 ntBASIC12.34□□□□□ -0.43
CEACAM3P40198 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CEACAM3P40198 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CEACAM3P40198 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.33□□□□□ -0.43
CEACAM3P40198 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.33□□□□□ -0.43
CEACAM3P40198 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CEACAM3P40198 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CEACAM3P40198 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CEACAM3P40198 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 LILRP1-201ENST00000444199 1370 ntBASIC12.33□□□□□ -0.44
CEACAM3P40198 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 COX5BP8-201ENST00000416911 349 ntBASIC12.33□□□□□ -0.44
CEACAM3P40198 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 C2orf27AP3-201ENST00000434123 579 ntBASIC12.33□□□□□ -0.44
CEACAM3P40198 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.33□□□□□ -0.44
CEACAM3P40198 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.33□□□□□ -0.44
CEACAM3P40198 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.33□□□□□ -0.44
CEACAM3P40198 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.33□□□□□ -0.44
CEACAM3P40198 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CEACAM3P40198 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CEACAM3P40198 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.33□□□□□ -0.44
CEACAM3P40198 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 AL354718.3-201ENST00000616414 581 ntBASIC12.33□□□□□ -0.44
CEACAM3P40198 CR382287.1-201ENST00000623954 586 ntBASIC12.33□□□□□ -0.44
CEACAM3P40198 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 AL137784.3-201ENST00000623858 2288 ntBASIC12.33□□□□□ -0.44
CEACAM3P40198 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.33□□□□□ -0.44
CEACAM3P40198 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 REXO1L2P-201ENST00000425429 2069 ntBASIC12.33□□□□□ -0.44
CEACAM3P40198 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.33□□□□□ -0.44
CEACAM3P40198 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CEACAM3P40198 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms