Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC022616.1-201ENST00000518688 554 ntBASIC13.52□□□□□ -0.25
HLA-DOBP13765 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 DUX4L47-201ENST00000566374 394 ntBASIC13.52□□□□□ -0.25
HLA-DOBP13765 AP001063.1-201ENST00000568332 529 ntBASIC13.52□□□□□ -0.25
HLA-DOBP13765 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 RPSAP52-203ENST00000622976 1023 ntBASIC13.52□□□□□ -0.25
HLA-DOBP13765 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 AC055811.4-201ENST00000624039 1754 ntBASIC13.52□□□□□ -0.25
HLA-DOBP13765 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 AC097359.2-201ENST00000604992 2389 ntBASIC13.52□□□□□ -0.25
HLA-DOBP13765 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 SNX18-202ENST00000343017 3140 ntBASIC13.52□□□□□ -0.25
HLA-DOBP13765 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 AC026434.2-201ENST00000506094 1078 ntBASIC13.51□□□□□ -0.25
HLA-DOBP13765 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DOBP13765 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DOBP13765 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 LRRC59-203ENST00000576448 1531 ntBASIC13.5□□□□□ -0.25
HLA-DOBP13765 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms