Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.28□□□□□ -0.12
MT-ND1P03886 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.28□□□□□ -0.12
MT-ND1P03886 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MT-ND1P03886 AC025181.2-201ENST00000606994 802 ntBASIC14.28□□□□□ -0.12
MT-ND1P03886 AL133215.2-201ENST00000609242 977 ntBASIC14.28□□□□□ -0.12
MT-ND1P03886 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MT-ND1P03886 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.28□□□□□ -0.12
MT-ND1P03886 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MT-ND1P03886 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MT-ND1P03886 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MT-ND1P03886 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.28□□□□□ -0.12
MT-ND1P03886 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MT-ND1P03886 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MT-ND1P03886 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MT-ND1P03886 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MT-ND1P03886 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.27□□□□□ -0.12
MT-ND1P03886 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
MT-ND1P03886 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.27□□□□□ -0.12
MT-ND1P03886 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MT-ND1P03886 LILRP1-201ENST00000444199 1370 ntBASIC14.27□□□□□ -0.12
MT-ND1P03886 KRT8P12-202ENST00000472924 1397 ntBASIC14.27□□□□□ -0.12
MT-ND1P03886 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
MT-ND1P03886 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MT-ND1P03886 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.27□□□□□ -0.13
MT-ND1P03886 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.27□□□□□ -0.13
MT-ND1P03886 RPSAP43-201ENST00000402237 625 ntBASIC14.27□□□□□ -0.13
MT-ND1P03886 AC023141.5-201ENST00000458585 616 ntBASIC14.27□□□□□ -0.13
MT-ND1P03886 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.27□□□□□ -0.13
MT-ND1P03886 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.27□□□□□ -0.13
MT-ND1P03886 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.27□□□□□ -0.13
MT-ND1P03886 AC010327.4-202ENST00000591484 748 ntBASIC14.27□□□□□ -0.13
MT-ND1P03886 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.27□□□□□ -0.13
MT-ND1P03886 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MT-ND1P03886 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 AC105206.1-202ENST00000314927 2368 ntBASIC14.27□□□□□ -0.13
MT-ND1P03886 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MT-ND1P03886 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.27□□□□□ -0.13
MT-ND1P03886 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.27□□□□□ -0.13
MT-ND1P03886 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MT-ND1P03886 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.27□□□□□ -0.13
MT-ND1P03886 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.27□□□□□ -0.13
MT-ND1P03886 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.27□□□□□ -0.13
MT-ND1P03886 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.27□□□□□ -0.13
MT-ND1P03886 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
MT-ND1P03886 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MT-ND1P03886 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
MT-ND1P03886 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.27□□□□□ -0.13
MT-ND1P03886 AC055811.4-201ENST00000624039 1754 ntBASIC14.27□□□□□ -0.13
MT-ND1P03886 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MT-ND1P03886 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 DGCR9-201ENST00000609630 2415 ntBASIC14.26□□□□□ -0.13
MT-ND1P03886 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.26□□□□□ -0.13
MT-ND1P03886 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MT-ND1P03886 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MT-ND1P03886 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MT-ND1P03886 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.26□□□□□ -0.13
MT-ND1P03886 UPF3AP3-201ENST00000420996 769 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms